Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRIM2P49643 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.33■□□□□ 0.36
PRIM2P49643 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.33■□□□□ 0.36
PRIM2P49643 AL390955.1-201ENST00000428694 934 ntBASIC17.33■□□□□ 0.36
PRIM2P49643 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.33■□□□□ 0.36
PRIM2P49643 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PRIM2P49643 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.33■□□□□ 0.36
PRIM2P49643 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRIM2P49643 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.33■□□□□ 0.36
PRIM2P49643 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.33■□□□□ 0.36
PRIM2P49643 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.33■□□□□ 0.36
PRIM2P49643 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.33■□□□□ 0.36
PRIM2P49643 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRIM2P49643 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.33■□□□□ 0.36
PRIM2P49643 AC008764.6-201ENST00000595909 2069 ntBASIC17.33■□□□□ 0.36
PRIM2P49643 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRIM2P49643 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRIM2P49643 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.33■□□□□ 0.36
PRIM2P49643 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PRIM2P49643 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRIM2P49643 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PRIM2P49643 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.32■□□□□ 0.36
PRIM2P49643 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
PRIM2P49643 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRIM2P49643 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.32■□□□□ 0.36
PRIM2P49643 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRIM2P49643 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.32■□□□□ 0.36
PRIM2P49643 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 ESPNP-201ENST00000270691 2015 ntBASIC17.32■□□□□ 0.36
PRIM2P49643 AP003041.3-201ENST00000527151 707 ntBASIC17.32■□□□□ 0.36
PRIM2P49643 BX088651.1-201ENST00000540551 451 ntBASIC17.32■□□□□ 0.36
PRIM2P49643 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.32■□□□□ 0.36
PRIM2P49643 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.32■□□□□ 0.36
PRIM2P49643 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.32■□□□□ 0.36
PRIM2P49643 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 REXO1L9P-201ENST00000604264 2108 ntBASIC17.32■□□□□ 0.36
PRIM2P49643 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRIM2P49643 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.31■□□□□ 0.36
PRIM2P49643 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRIM2P49643 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.31■□□□□ 0.36
PRIM2P49643 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 FZD10-202ENST00000539839 3282 ntBASIC17.31■□□□□ 0.36
PRIM2P49643 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PRIM2P49643 AC138028.4-201ENST00000564984 1845 ntBASIC17.31■□□□□ 0.36
PRIM2P49643 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PRIM2P49643 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PRIM2P49643 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PRIM2P49643 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.31■□□□□ 0.36
PRIM2P49643 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.31■□□□□ 0.36
PRIM2P49643 TSPY15P-201ENST00000457163 923 ntBASIC17.31■□□□□ 0.36
PRIM2P49643 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.31■□□□□ 0.36
PRIM2P49643 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.31■□□□□ 0.36
PRIM2P49643 MIR4674-201ENST00000582457 87 ntBASIC17.31■□□□□ 0.36
PRIM2P49643 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PRIM2P49643 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.31■□□□□ 0.36
PRIM2P49643 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRIM2P49643 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.31■□□□□ 0.36
PRIM2P49643 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.31■□□□□ 0.36
PRIM2P49643 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PRIM2P49643 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PRIM2P49643 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.3■□□□□ 0.36
PRIM2P49643 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PRIM2P49643 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.3■□□□□ 0.36
PRIM2P49643 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRIM2P49643 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms