Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1DP48730 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1DP48730 AL845331.1-201ENST00000424978 1190 ntBASIC18.2■□□□□ 0.5
CSNK1DP48730 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.2■□□□□ 0.5
CSNK1DP48730 AC112698.1-201ENST00000510299 916 ntBASIC18.2■□□□□ 0.5
CSNK1DP48730 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1DP48730 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.2■□□□□ 0.5
CSNK1DP48730 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 AC092119.3-201ENST00000612618 583 ntBASIC18.2■□□□□ 0.5
CSNK1DP48730 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CSNK1DP48730 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CSNK1DP48730 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CSNK1DP48730 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1DP48730 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1DP48730 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 ABALON-201ENST00000629058 1903 ntBASIC18.19■□□□□ 0.5
CSNK1DP48730 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 AC233702.3-201ENST00000578656 1387 ntBASIC18.19■□□□□ 0.5
CSNK1DP48730 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CSNK1DP48730 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 VENTXP7-201ENST00000475503 772 ntBASIC18.19■□□□□ 0.5
CSNK1DP48730 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CSNK1DP48730 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.19■□□□□ 0.5
CSNK1DP48730 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.19■□□□□ 0.5
CSNK1DP48730 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.19■□□□□ 0.5
CSNK1DP48730 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.19■□□□□ 0.5
CSNK1DP48730 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.19■□□□□ 0.5
CSNK1DP48730 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1DP48730 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.19■□□□□ 0.5
CSNK1DP48730 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1DP48730 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1DP48730 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1DP48730 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 HCG4P8-203ENST00000443049 980 ntBASIC18.18■□□□□ 0.5
CSNK1DP48730 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.18■□□□□ 0.5
CSNK1DP48730 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.18■□□□□ 0.5
CSNK1DP48730 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1DP48730 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.18■□□□□ 0.5
CSNK1DP48730 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CSNK1DP48730 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CSNK1DP48730 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1DP48730 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CSNK1DP48730 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1DP48730 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1DP48730 FLJ13224-201ENST00000313737 1514 ntBASIC18.18■□□□□ 0.5
CSNK1DP48730 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CSNK1DP48730 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.17■□□□□ 0.5
CSNK1DP48730 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.17■□□□□ 0.5
CSNK1DP48730 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.17■□□□□ 0.5
CSNK1DP48730 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.17■□□□□ 0.5
CSNK1DP48730 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.17■□□□□ 0.5
CSNK1DP48730 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
CSNK1DP48730 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CSNK1DP48730 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CSNK1DP48730 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.17■□□□□ 0.5
CSNK1DP48730 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1DP48730 TOB2P1-201ENST00000469761 992 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms