Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KRT6CP48668 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.66■□□□□ 0.42
KRT6CP48668 AC128688.1-201ENST00000487626 519 ntBASIC17.66■□□□□ 0.42
KRT6CP48668 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6CP48668 EGLN1P1-201ENST00000531623 762 ntBASIC17.66■□□□□ 0.42
KRT6CP48668 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6CP48668 AC104390.1-201ENST00000555663 520 ntBASIC17.66■□□□□ 0.42
KRT6CP48668 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KRT6CP48668 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT6CP48668 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6CP48668 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT6CP48668 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KRT6CP48668 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT6CP48668 PCDHB18P-201ENST00000524813 2368 ntBASIC17.66■□□□□ 0.42
KRT6CP48668 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KRT6CP48668 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT6CP48668 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KRT6CP48668 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KRT6CP48668 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.65■□□□□ 0.42
KRT6CP48668 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
KRT6CP48668 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT6CP48668 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT6CP48668 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT6CP48668 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT6CP48668 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT6CP48668 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT6CP48668 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT6CP48668 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6CP48668 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KRT6CP48668 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
KRT6CP48668 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT6CP48668 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT6CP48668 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT6CP48668 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
KRT6CP48668 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT6CP48668 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
KRT6CP48668 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KRT6CP48668 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 GNAS-203ENST00000306120 1878 ntBASIC17.64■□□□□ 0.41
KRT6CP48668 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT6CP48668 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT6CP48668 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KRT6CP48668 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KRT6CP48668 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6CP48668 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT6CP48668 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT6CP48668 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6CP48668 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
KRT6CP48668 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6CP48668 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6CP48668 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KRT6CP48668 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6CP48668 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
KRT6CP48668 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KRT6CP48668 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT6CP48668 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT6CP48668 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT6CP48668 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT6CP48668 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.63■□□□□ 0.41
KRT6CP48668 MIR4497-201ENST00000583208 89 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms