Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC6A12P48065 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC6A12P48065 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC6A12P48065 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC6A12P48065 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC6A12P48065 RNF152P1-201ENST00000397754 604 ntBASIC17.55■□□□□ 0.4
SLC6A12P48065 TSPY5P-201ENST00000426936 936 ntBASIC17.55■□□□□ 0.4
SLC6A12P48065 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SLC6A12P48065 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SLC6A12P48065 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC6A12P48065 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SLC6A12P48065 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC6A12P48065 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC6A12P48065 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SLC6A12P48065 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.54■□□□□ 0.4
SLC6A12P48065 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC6A12P48065 KRT18P38-201ENST00000449496 1282 ntBASIC17.54■□□□□ 0.4
SLC6A12P48065 AC092597.1-201ENST00000487352 616 ntBASIC17.54■□□□□ 0.4
SLC6A12P48065 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC6A12P48065 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC6A12P48065 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC6A12P48065 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC6A12P48065 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC6A12P48065 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SLC6A12P48065 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC6A12P48065 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC6A12P48065 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC6A12P48065 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC6A12P48065 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC6A12P48065 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
SLC6A12P48065 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC6A12P48065 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC6A12P48065 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC6A12P48065 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC6A12P48065 LINC00602-201ENST00000629776 2065 ntBASIC17.53■□□□□ 0.4
SLC6A12P48065 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC6A12P48065 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC6A12P48065 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC6A12P48065 HOMER2P1-201ENST00000455653 964 ntBASIC17.53■□□□□ 0.4
SLC6A12P48065 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC6A12P48065 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC6A12P48065 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC6A12P48065 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC6A12P48065 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC6A12P48065 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC6A12P48065 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC6A12P48065 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC6A12P48065 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC6A12P48065 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC6A12P48065 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC6A12P48065 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms