Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 AL109659.2-201ENST00000606809 1674 ntBASIC12.29□□□□□ -0.44
CXCL5P42830 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL5P42830 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CXCL5P42830 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CXCL5P42830 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL5P42830 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CXCL5P42830 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
CXCL5P42830 AC239809.2-201ENST00000415381 517 ntBASIC12.29□□□□□ -0.44
CXCL5P42830 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 UNC93B5-201ENST00000530315 699 ntBASIC12.29□□□□□ -0.44
CXCL5P42830 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.29□□□□□ -0.44
CXCL5P42830 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL5P42830 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL5P42830 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CXCL5P42830 GMCL1P1-201ENST00000463439 1581 ntBASIC12.29□□□□□ -0.44
CXCL5P42830 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
CXCL5P42830 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CXCL5P42830 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL5P42830 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CXCL5P42830 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL5P42830 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
CXCL5P42830 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.28□□□□□ -0.44
CXCL5P42830 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL5P42830 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL5P42830 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.28□□□□□ -0.44
CXCL5P42830 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL5P42830 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL5P42830 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 PCDHA12-202ENST00000613593 2588 ntBASIC12.28□□□□□ -0.44
CXCL5P42830 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL5P42830 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CXCL5P42830 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL5P42830 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms