Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NCAPD3P42695 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NCAPD3P42695 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC31.93■■■□□ 2.7
NCAPD3P42695 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC31.93■■■□□ 2.7
NCAPD3P42695 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NCAPD3P42695 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NCAPD3P42695 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
NCAPD3P42695 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
NCAPD3P42695 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
NCAPD3P42695 AC004461.1-201ENST00000412461 403 ntBASIC31.92■■■□□ 2.7
NCAPD3P42695 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC31.92■■■□□ 2.7
NCAPD3P42695 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC31.92■■■□□ 2.7
NCAPD3P42695 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC31.92■■■□□ 2.7
NCAPD3P42695 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
NCAPD3P42695 MIR4745-201ENST00000577608 62 ntBASIC31.92■■■□□ 2.7
NCAPD3P42695 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC31.92■■■□□ 2.7
NCAPD3P42695 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NCAPD3P42695 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NCAPD3P42695 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NCAPD3P42695 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC31.91■■■□□ 2.7
NCAPD3P42695 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC31.91■■■□□ 2.7
NCAPD3P42695 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC31.91■■■□□ 2.7
NCAPD3P42695 FAM58CP-201ENST00000435741 640 ntBASIC31.91■■■□□ 2.7
NCAPD3P42695 AC109322.1-201ENST00000524499 1264 ntBASIC31.91■■■□□ 2.7
NCAPD3P42695 AC096734.2-201ENST00000562054 433 ntBASIC31.91■■■□□ 2.7
NCAPD3P42695 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC31.91■■■□□ 2.7
NCAPD3P42695 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
NCAPD3P42695 NCF1C-201ENST00000438382 1427 ntBASIC31.91■■■□□ 2.7
NCAPD3P42695 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
NCAPD3P42695 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NCAPD3P42695 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NCAPD3P42695 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
NCAPD3P42695 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NCAPD3P42695 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NCAPD3P42695 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NCAPD3P42695 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC31.91■■■□□ 2.7
NCAPD3P42695 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC31.91■■■□□ 2.7
NCAPD3P42695 AC092474.2-201ENST00000424288 719 ntBASIC31.91■■■□□ 2.7
NCAPD3P42695 RBM7-207ENST00000544582 692 ntTSL 3 BASIC31.91■■■□□ 2.7
NCAPD3P42695 AC004877.2-201ENST00000623941 599 ntBASIC31.91■■■□□ 2.7
NCAPD3P42695 AC092902.6-201ENST00000641783 218 ntBASIC31.91■■■□□ 2.7
NCAPD3P42695 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC31.9■■■□□ 2.7
NCAPD3P42695 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC31.9■■■□□ 2.7
NCAPD3P42695 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC31.9■■■□□ 2.7
NCAPD3P42695 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC31.9■■■□□ 2.7
NCAPD3P42695 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC31.9■■■□□ 2.7
NCAPD3P42695 ADH5P3-201ENST00000433842 1137 ntBASIC31.9■■■□□ 2.7
NCAPD3P42695 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC31.9■■■□□ 2.7
NCAPD3P42695 AQP6-205ENST00000618286 829 ntTSL 5 BASIC31.9■■■□□ 2.7
NCAPD3P42695 AC091812.2-201ENST00000619081 385 ntBASIC31.9■■■□□ 2.7
NCAPD3P42695 AJ011932.1-201ENST00000621707 465 ntBASIC31.9■■■□□ 2.7
NCAPD3P42695 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NCAPD3P42695 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NCAPD3P42695 AC112907.3-201ENST00000577781 2400 ntBASIC31.89■■■□□ 2.7
NCAPD3P42695 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NCAPD3P42695 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC31.89■■■□□ 2.7
NCAPD3P42695 AC148477.5-201ENST00000625164 1645 ntBASIC31.89■■■□□ 2.7
NCAPD3P42695 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NCAPD3P42695 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
NCAPD3P42695 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NCAPD3P42695 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC31.89■■■□□ 2.7
NCAPD3P42695 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC31.89■■■□□ 2.7
NCAPD3P42695 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC31.89■■■□□ 2.7
NCAPD3P42695 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC31.89■■■□□ 2.7
NCAPD3P42695 AC190387.1-201ENST00000551683 408 ntBASIC31.89■■■□□ 2.7
NCAPD3P42695 OR7E47P-204ENST00000575924 449 ntBASIC31.89■■■□□ 2.7
NCAPD3P42695 AC004835.2-201ENST00000603762 682 ntBASIC31.89■■■□□ 2.7
NCAPD3P42695 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NCAPD3P42695 AC073592.5-201ENST00000624854 528 ntBASIC31.89■■■□□ 2.7
NCAPD3P42695 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NCAPD3P42695 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
NCAPD3P42695 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC31.88■■■□□ 2.69
NCAPD3P42695 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
NCAPD3P42695 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NCAPD3P42695 AL353593.2-201ENST00000602529 1483 ntBASIC31.88■■■□□ 2.69
NCAPD3P42695 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
NCAPD3P42695 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
NCAPD3P42695 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NCAPD3P42695 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NCAPD3P42695 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC31.88■■■□□ 2.69
NCAPD3P42695 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC31.88■■■□□ 2.69
NCAPD3P42695 CYB561-217ENST00000582997 877 ntTSL 5 BASIC31.88■■■□□ 2.69
NCAPD3P42695 AL035252.4-201ENST00000624174 288 ntBASIC31.88■■■□□ 2.69
NCAPD3P42695 AC105339.1-204ENST00000636249 355 ntBASIC31.88■■■□□ 2.69
NCAPD3P42695 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NCAPD3P42695 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC31.87■■■□□ 2.69
NCAPD3P42695 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
NCAPD3P42695 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC31.87■■■□□ 2.69
NCAPD3P42695 AC099343.3-201ENST00000605834 2503 ntBASIC31.87■■■□□ 2.69
NCAPD3P42695 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NCAPD3P42695 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
NCAPD3P42695 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC31.87■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms