Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 AL031432.5-201ENST00000641059 760 ntBASIC18.43■□□□□ 0.54
HADHAP40939 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 PCDHB18P-201ENST00000524813 2368 ntBASIC18.43■□□□□ 0.54
HADHAP40939 AC009102.3-201ENST00000623118 1491 ntBASIC18.43■□□□□ 0.54
HADHAP40939 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.43■□□□□ 0.54
HADHAP40939 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.43■□□□□ 0.54
HADHAP40939 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
HADHAP40939 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HADHAP40939 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.43■□□□□ 0.54
HADHAP40939 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HADHAP40939 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.43■□□□□ 0.54
HADHAP40939 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HADHAP40939 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.42■□□□□ 0.54
HADHAP40939 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.42■□□□□ 0.54
HADHAP40939 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.42■□□□□ 0.54
HADHAP40939 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HADHAP40939 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
HADHAP40939 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HADHAP40939 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HADHAP40939 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HADHAP40939 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.42■□□□□ 0.54
HADHAP40939 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HADHAP40939 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.42■□□□□ 0.54
HADHAP40939 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
HADHAP40939 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
HADHAP40939 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HADHAP40939 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.42■□□□□ 0.54
HADHAP40939 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HADHAP40939 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
HADHAP40939 AC010203.1-204ENST00000548782 407 ntBASIC18.42■□□□□ 0.54
HADHAP40939 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.42■□□□□ 0.54
HADHAP40939 AC024243.1-201ENST00000609234 778 ntBASIC18.42■□□□□ 0.54
HADHAP40939 AC092865.7-201ENST00000641832 219 ntBASIC18.42■□□□□ 0.54
HADHAP40939 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HADHAP40939 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HADHAP40939 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HADHAP40939 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.42■□□□□ 0.54
HADHAP40939 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.42■□□□□ 0.54
HADHAP40939 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.41■□□□□ 0.54
HADHAP40939 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HADHAP40939 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.41■□□□□ 0.54
HADHAP40939 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.41■□□□□ 0.54
HADHAP40939 FLJ13224-201ENST00000313737 1514 ntBASIC18.41■□□□□ 0.54
HADHAP40939 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.41■□□□□ 0.54
HADHAP40939 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.41■□□□□ 0.54
HADHAP40939 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.41■□□□□ 0.54
HADHAP40939 SEC1P-202ENST00000473944 940 ntBASIC18.41■□□□□ 0.54
HADHAP40939 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.41■□□□□ 0.54
HADHAP40939 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.41■□□□□ 0.54
HADHAP40939 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.41■□□□□ 0.54
HADHAP40939 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.41■□□□□ 0.54
HADHAP40939 AC010240.3-201ENST00000607688 395 ntBASIC18.41■□□□□ 0.54
HADHAP40939 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HADHAP40939 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HADHAP40939 AC005332.8-201ENST00000622750 2735 ntBASIC18.41■□□□□ 0.54
HADHAP40939 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HADHAP40939 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HADHAP40939 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HADHAP40939 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HADHAP40939 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.4■□□□□ 0.54
HADHAP40939 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.4■□□□□ 0.54
HADHAP40939 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HADHAP40939 TERF1P1-201ENST00000311003 1181 ntBASIC18.4■□□□□ 0.54
HADHAP40939 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 MIR1224-201ENST00000408193 85 ntBASIC18.4■□□□□ 0.54
HADHAP40939 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HADHAP40939 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.4■□□□□ 0.54
HADHAP40939 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.4■□□□□ 0.54
HADHAP40939 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.4■□□□□ 0.54
HADHAP40939 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HADHAP40939 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms