Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.82■□□□□ 0.76
USP8P40818 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP8P40818 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 NOC2LP2-201ENST00000407594 1944 ntBASIC19.82■□□□□ 0.76
USP8P40818 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.82■□□□□ 0.76
USP8P40818 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.82■□□□□ 0.76
USP8P40818 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
USP8P40818 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
USP8P40818 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.81■□□□□ 0.76
USP8P40818 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 ABALON-201ENST00000629058 1903 ntBASIC19.81■□□□□ 0.76
USP8P40818 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.81■□□□□ 0.76
USP8P40818 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.81■□□□□ 0.76
USP8P40818 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
USP8P40818 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.81■□□□□ 0.76
USP8P40818 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.81■□□□□ 0.76
USP8P40818 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
USP8P40818 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP8P40818 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP8P40818 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
USP8P40818 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 LINC01568-207ENST00000641790 1380 ntBASIC19.81■□□□□ 0.76
USP8P40818 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.81■□□□□ 0.76
USP8P40818 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP8P40818 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
USP8P40818 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.8■□□□□ 0.76
USP8P40818 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
USP8P40818 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.8■□□□□ 0.76
USP8P40818 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
USP8P40818 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.8■□□□□ 0.76
USP8P40818 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.8■□□□□ 0.76
USP8P40818 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.8■□□□□ 0.76
USP8P40818 WWOX-216ENST00000569818 525 ntBASIC19.8■□□□□ 0.76
USP8P40818 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.8■□□□□ 0.76
USP8P40818 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
USP8P40818 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.8■□□□□ 0.76
USP8P40818 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.8■□□□□ 0.76
USP8P40818 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP8P40818 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.8■□□□□ 0.76
USP8P40818 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
USP8P40818 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.8■□□□□ 0.76
USP8P40818 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
USP8P40818 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP8P40818 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.79■□□□□ 0.76
USP8P40818 AC106820.2-201ENST00000563775 3264 ntBASIC19.79■□□□□ 0.76
USP8P40818 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
USP8P40818 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.79■□□□□ 0.76
USP8P40818 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.79■□□□□ 0.76
USP8P40818 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.79■□□□□ 0.76
USP8P40818 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.79■□□□□ 0.76
USP8P40818 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
USP8P40818 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.79■□□□□ 0.76
USP8P40818 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.79■□□□□ 0.76
USP8P40818 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.79■□□□□ 0.76
USP8P40818 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.79■□□□□ 0.76
USP8P40818 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
USP8P40818 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 ESPNP-201ENST00000270691 2015 ntBASIC19.79■□□□□ 0.76
USP8P40818 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USP8P40818 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.79■□□□□ 0.76
USP8P40818 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms