Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.42■□□□□ 0.86
CTGFP29279 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.42■□□□□ 0.86
CTGFP29279 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.42■□□□□ 0.86
CTGFP29279 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.42■□□□□ 0.86
CTGFP29279 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CTGFP29279 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.42■□□□□ 0.86
CTGFP29279 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CTGFP29279 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.42■□□□□ 0.86
CTGFP29279 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CTGFP29279 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CTGFP29279 AD001527.2-201ENST00000622994 785 ntBASIC20.42■□□□□ 0.86
CTGFP29279 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.42■□□□□ 0.86
CTGFP29279 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.42■□□□□ 0.86
CTGFP29279 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.42■□□□□ 0.86
CTGFP29279 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CTGFP29279 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.41■□□□□ 0.86
CTGFP29279 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.41■□□□□ 0.86
CTGFP29279 MIR770-201ENST00000390219 98 ntBASIC20.41■□□□□ 0.86
CTGFP29279 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.41■□□□□ 0.86
CTGFP29279 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.41■□□□□ 0.86
CTGFP29279 PRYP5-201ENST00000451909 266 ntBASIC20.41■□□□□ 0.86
CTGFP29279 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.41■□□□□ 0.86
CTGFP29279 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.41■□□□□ 0.86
CTGFP29279 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.41■□□□□ 0.86
CTGFP29279 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.41■□□□□ 0.86
CTGFP29279 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTGFP29279 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CTGFP29279 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.4■□□□□ 0.86
CTGFP29279 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.4■□□□□ 0.86
CTGFP29279 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.4■□□□□ 0.86
CTGFP29279 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.4■□□□□ 0.86
CTGFP29279 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.4■□□□□ 0.86
CTGFP29279 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.4■□□□□ 0.86
CTGFP29279 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.4■□□□□ 0.86
CTGFP29279 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.4■□□□□ 0.86
CTGFP29279 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CTGFP29279 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.4■□□□□ 0.86
CTGFP29279 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.4■□□□□ 0.86
CTGFP29279 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTGFP29279 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTGFP29279 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CTGFP29279 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.39■□□□□ 0.86
CTGFP29279 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CTGFP29279 AC006504.4-201ENST00000592118 1568 ntBASIC20.39■□□□□ 0.85
CTGFP29279 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CTGFP29279 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.39■□□□□ 0.85
CTGFP29279 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.39■□□□□ 0.85
CTGFP29279 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CTGFP29279 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.39■□□□□ 0.85
CTGFP29279 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.39■□□□□ 0.85
CTGFP29279 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CTGFP29279 AL161938.1-201ENST00000569833 2180 ntBASIC20.39■□□□□ 0.85
CTGFP29279 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.39■□□□□ 0.85
CTGFP29279 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTGFP29279 ELL2P1-201ENST00000413990 1906 ntBASIC20.39■□□□□ 0.85
CTGFP29279 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CTGFP29279 AC007952.6-201ENST00000573168 2673 ntBASIC20.39■□□□□ 0.85
CTGFP29279 AC003957.1-201ENST00000625108 2673 ntBASIC20.39■□□□□ 0.85
CTGFP29279 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms