Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.35■□□□□ 0.05
COL8A2P25067 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COL8A2P25067 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL8A2P25067 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.35■□□□□ 0.05
COL8A2P25067 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.35■□□□□ 0.05
COL8A2P25067 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
COL8A2P25067 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL8A2P25067 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL8A2P25067 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
COL8A2P25067 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL8A2P25067 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.34■□□□□ 0.05
COL8A2P25067 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.34■□□□□ 0.05
COL8A2P25067 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
COL8A2P25067 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.34■□□□□ 0.05
COL8A2P25067 AL024508.2-201ENST00000607749 1894 ntBASIC15.34■□□□□ 0.05
COL8A2P25067 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.34■□□□□ 0.05
COL8A2P25067 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
COL8A2P25067 NUS1P1-201ENST00000446295 882 ntBASIC15.34■□□□□ 0.05
COL8A2P25067 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.34■□□□□ 0.05
COL8A2P25067 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.34■□□□□ 0.05
COL8A2P25067 AL592071.1-201ENST00000611956 408 ntBASIC15.34■□□□□ 0.05
COL8A2P25067 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COL8A2P25067 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.34■□□□□ 0.05
COL8A2P25067 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
COL8A2P25067 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COL8A2P25067 AC233702.3-201ENST00000578656 1387 ntBASIC15.34■□□□□ 0.05
COL8A2P25067 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COL8A2P25067 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
COL8A2P25067 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL8A2P25067 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL8A2P25067 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL8A2P25067 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL8A2P25067 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL8A2P25067 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
COL8A2P25067 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL8A2P25067 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
COL8A2P25067 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL8A2P25067 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL8A2P25067 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COL8A2P25067 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 LINC01126-201ENST00000623515 1646 ntBASIC15.33■□□□□ 0.04
COL8A2P25067 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
COL8A2P25067 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.33■□□□□ 0.04
COL8A2P25067 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
COL8A2P25067 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.33■□□□□ 0.04
COL8A2P25067 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COL8A2P25067 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 AC074051.2-201ENST00000565115 352 ntBASIC15.33■□□□□ 0.04
COL8A2P25067 AC012615.1-201ENST00000565797 1299 ntBASIC15.33■□□□□ 0.04
COL8A2P25067 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.33■□□□□ 0.04
COL8A2P25067 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
COL8A2P25067 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.33■□□□□ 0.04
COL8A2P25067 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.33■□□□□ 0.04
COL8A2P25067 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.33■□□□□ 0.04
COL8A2P25067 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
COL8A2P25067 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.33■□□□□ 0.04
COL8A2P25067 AL031598.1-201ENST00000561511 1773 ntBASIC15.33■□□□□ 0.04
COL8A2P25067 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.33■□□□□ 0.04
COL8A2P25067 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 FZD10-202ENST00000539839 3282 ntBASIC15.33■□□□□ 0.04
COL8A2P25067 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
COL8A2P25067 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL8A2P25067 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COL8A2P25067 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.32■□□□□ 0.04
COL8A2P25067 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COL8A2P25067 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms