Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC099398.1-201ENST00000567919 2776 ntBASIC17.83■□□□□ 0.45
CDH3P22223 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH3P22223 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CDH3P22223 AC005332.1-201ENST00000577698 1310 ntBASIC17.83■□□□□ 0.44
CDH3P22223 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH3P22223 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH3P22223 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDH3P22223 UPK3BP1-201ENST00000428678 509 ntBASIC17.83■□□□□ 0.44
CDH3P22223 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH3P22223 AL136038.3-201ENST00000561909 1096 ntBASIC17.83■□□□□ 0.44
CDH3P22223 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH3P22223 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH3P22223 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH3P22223 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDH3P22223 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDH3P22223 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDH3P22223 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH3P22223 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDH3P22223 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH3P22223 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.82■□□□□ 0.44
CDH3P22223 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH3P22223 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH3P22223 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH3P22223 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH3P22223 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH3P22223 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.82■□□□□ 0.44
CDH3P22223 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH3P22223 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH3P22223 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH3P22223 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH3P22223 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH3P22223 PRORSD1P-202ENST00000563365 2154 ntBASIC17.81■□□□□ 0.44
CDH3P22223 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH3P22223 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH3P22223 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH3P22223 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDH3P22223 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH3P22223 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDH3P22223 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDH3P22223 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH3P22223 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH3P22223 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH3P22223 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH3P22223 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CDH3P22223 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH3P22223 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH3P22223 AL136038.4-201ENST00000603606 1261 ntBASIC17.81■□□□□ 0.44
CDH3P22223 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CDH3P22223 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CDH3P22223 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH3P22223 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH3P22223 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms