Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
KRT4P19013 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KRT4P19013 AL023284.2-201ENST00000405850 579 ntBASIC18.28■□□□□ 0.52
KRT4P19013 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
KRT4P19013 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT4P19013 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT4P19013 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
KRT4P19013 AL031985.4-201ENST00000642138 673 ntBASIC18.28■□□□□ 0.52
KRT4P19013 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT4P19013 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT4P19013 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT4P19013 KRT18P55-202ENST00000578578 1546 ntBASIC18.28■□□□□ 0.52
KRT4P19013 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KRT4P19013 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KRT4P19013 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
KRT4P19013 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
KRT4P19013 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 AC084018.2-201ENST00000613093 2607 ntBASIC18.27■□□□□ 0.52
KRT4P19013 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
KRT4P19013 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT4P19013 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KRT4P19013 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT4P19013 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 AD000864.1-201ENST00000624076 2295 ntBASIC18.27■□□□□ 0.52
KRT4P19013 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KRT4P19013 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KRT4P19013 MCCD1P1-208ENST00000445732 328 ntBASIC18.27■□□□□ 0.52
KRT4P19013 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.27■□□□□ 0.52
KRT4P19013 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT4P19013 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.27■□□□□ 0.52
KRT4P19013 CR392000.1-201ENST00000624770 1228 ntBASIC18.27■□□□□ 0.52
KRT4P19013 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT4P19013 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT4P19013 GPAT2P1-201ENST00000444924 1672 ntBASIC18.27■□□□□ 0.52
KRT4P19013 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
KRT4P19013 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT4P19013 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.27■□□□□ 0.51
KRT4P19013 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KRT4P19013 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT4P19013 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
KRT4P19013 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
KRT4P19013 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT4P19013 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT4P19013 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.27■□□□□ 0.51
KRT4P19013 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
KRT4P19013 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
KRT4P19013 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT4P19013 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT4P19013 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT4P19013 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
KRT4P19013 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT4P19013 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT4P19013 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRT4P19013 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT4P19013 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT4P19013 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT4P19013 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT4P19013 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT4P19013 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT4P19013 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT4P19013 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT4P19013 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT4P19013 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT4P19013 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT4P19013 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.25■□□□□ 0.51
KRT4P19013 AC011506.1-201ENST00000474329 610 ntBASIC18.25■□□□□ 0.51
KRT4P19013 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.25■□□□□ 0.51
KRT4P19013 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.25■□□□□ 0.51
KRT4P19013 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KRT4P19013 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms