Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LINC01311-201ENST00000565162 1445 ntBASIC18.72■□□□□ 0.59
ERCC2P18074 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ERCC2P18074 AC138028.4-201ENST00000564984 1845 ntBASIC18.72■□□□□ 0.59
ERCC2P18074 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ERCC2P18074 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ERCC2P18074 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC2P18074 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC2P18074 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
ERCC2P18074 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC2P18074 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.71■□□□□ 0.59
ERCC2P18074 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC2P18074 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.71■□□□□ 0.59
ERCC2P18074 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC2P18074 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC2P18074 AL049597.2-201ENST00000565575 961 ntBASIC18.71■□□□□ 0.59
ERCC2P18074 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC2P18074 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC2P18074 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC2P18074 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.71■□□□□ 0.59
ERCC2P18074 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ERCC2P18074 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ERCC2P18074 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC2P18074 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
ERCC2P18074 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC2P18074 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
ERCC2P18074 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC2P18074 KRT89P-201ENST00000620027 1478 ntBASIC18.71■□□□□ 0.59
ERCC2P18074 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.7■□□□□ 0.58
ERCC2P18074 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.7■□□□□ 0.58
ERCC2P18074 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.7■□□□□ 0.58
ERCC2P18074 VENTXP5-201ENST00000523979 775 ntBASIC18.7■□□□□ 0.58
ERCC2P18074 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ERCC2P18074 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.7■□□□□ 0.58
ERCC2P18074 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.7■□□□□ 0.58
ERCC2P18074 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC2P18074 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC2P18074 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 AC132938.6-201ENST00000623828 1655 ntBASIC18.69■□□□□ 0.58
ERCC2P18074 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC2P18074 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms