Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHAP12694 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BCKDHAP12694 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BCKDHAP12694 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.4■□□□□ 0.38
BCKDHAP12694 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
BCKDHAP12694 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BCKDHAP12694 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 TSPY14P-201ENST00000303979 915 ntBASIC17.4■□□□□ 0.38
BCKDHAP12694 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.4■□□□□ 0.38
BCKDHAP12694 SNORA78-201ENST00000459373 127 ntBASIC17.4■□□□□ 0.38
BCKDHAP12694 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.4■□□□□ 0.38
BCKDHAP12694 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.4■□□□□ 0.38
BCKDHAP12694 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
BCKDHAP12694 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHAP12694 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.4■□□□□ 0.38
BCKDHAP12694 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.4■□□□□ 0.38
BCKDHAP12694 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
BCKDHAP12694 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BCKDHAP12694 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.39■□□□□ 0.38
BCKDHAP12694 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BCKDHAP12694 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 INGX-201ENST00000359239 846 ntBASIC17.39■□□□□ 0.37
BCKDHAP12694 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.39■□□□□ 0.37
BCKDHAP12694 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.39■□□□□ 0.37
BCKDHAP12694 TMEM191A-211ENST00000637163 1067 ntBASIC17.39■□□□□ 0.37
BCKDHAP12694 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BCKDHAP12694 AC006116.8-202ENST00000587620 1550 ntBASIC17.39■□□□□ 0.37
BCKDHAP12694 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
BCKDHAP12694 KRT17P2-201ENST00000300992 1314 ntBASIC17.39■□□□□ 0.37
BCKDHAP12694 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.39■□□□□ 0.37
BCKDHAP12694 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BCKDHAP12694 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.39■□□□□ 0.37
BCKDHAP12694 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
BCKDHAP12694 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHAP12694 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHAP12694 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHAP12694 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 KRT18P55-202ENST00000578578 1546 ntBASIC17.38■□□□□ 0.37
BCKDHAP12694 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHAP12694 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BCKDHAP12694 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.38■□□□□ 0.37
BCKDHAP12694 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 EGLN1P1-201ENST00000531623 762 ntBASIC17.38■□□□□ 0.37
BCKDHAP12694 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.38■□□□□ 0.37
BCKDHAP12694 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.38■□□□□ 0.37
BCKDHAP12694 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.38■□□□□ 0.37
BCKDHAP12694 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.38■□□□□ 0.37
BCKDHAP12694 AC010240.3-201ENST00000607688 395 ntBASIC17.38■□□□□ 0.37
BCKDHAP12694 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHAP12694 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHAP12694 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHAP12694 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHAP12694 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHAP12694 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms