Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AL355075.4-201ENST00000554988 638 ntBASIC19.41■□□□□ 0.7
FAM228BP0C875 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FAM228BP0C875 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM228BP0C875 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM228BP0C875 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM228BP0C875 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.41■□□□□ 0.7
FAM228BP0C875 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM228BP0C875 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
FAM228BP0C875 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FAM228BP0C875 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 MIR718-201ENST00000390190 70 ntBASIC19.4■□□□□ 0.7
FAM228BP0C875 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.4■□□□□ 0.7
FAM228BP0C875 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.4■□□□□ 0.7
FAM228BP0C875 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.4■□□□□ 0.7
FAM228BP0C875 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.4■□□□□ 0.7
FAM228BP0C875 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.4■□□□□ 0.7
FAM228BP0C875 AC010240.3-201ENST00000607688 395 ntBASIC19.4■□□□□ 0.7
FAM228BP0C875 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FAM228BP0C875 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FAM228BP0C875 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
FAM228BP0C875 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM228BP0C875 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.4■□□□□ 0.7
FAM228BP0C875 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.4■□□□□ 0.7
FAM228BP0C875 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.39■□□□□ 0.7
FAM228BP0C875 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FAM228BP0C875 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.39■□□□□ 0.69
FAM228BP0C875 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FAM228BP0C875 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 TSPY14P-201ENST00000303979 915 ntBASIC19.39■□□□□ 0.69
FAM228BP0C875 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
FAM228BP0C875 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.39■□□□□ 0.69
FAM228BP0C875 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.39■□□□□ 0.69
FAM228BP0C875 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 AC009065.1-201ENST00000564055 1225 ntBASIC19.39■□□□□ 0.69
FAM228BP0C875 C2orf69P3-201ENST00000565542 1120 ntBASIC19.39■□□□□ 0.69
FAM228BP0C875 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 AC010653.2-201ENST00000623505 997 ntBASIC19.39■□□□□ 0.69
FAM228BP0C875 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
FAM228BP0C875 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.39■□□□□ 0.69
FAM228BP0C875 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.39■□□□□ 0.69
FAM228BP0C875 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FAM228BP0C875 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
FAM228BP0C875 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM228BP0C875 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FAM228BP0C875 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.38■□□□□ 0.69
FAM228BP0C875 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FAM228BP0C875 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FAM228BP0C875 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.38■□□□□ 0.69
FAM228BP0C875 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.38■□□□□ 0.69
FAM228BP0C875 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.38■□□□□ 0.69
FAM228BP0C875 SNORA78-201ENST00000459373 127 ntBASIC19.38■□□□□ 0.69
FAM228BP0C875 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.38■□□□□ 0.69
FAM228BP0C875 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
FAM228BP0C875 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.38■□□□□ 0.69
FAM228BP0C875 AC132938.6-201ENST00000623828 1655 ntBASIC19.38■□□□□ 0.69
FAM228BP0C875 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
FAM228BP0C875 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM228BP0C875 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.37■□□□□ 0.69
FAM228BP0C875 CYP2D8P-201ENST00000433633 1490 ntBASIC19.37■□□□□ 0.69
FAM228BP0C875 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.37■□□□□ 0.69
FAM228BP0C875 TSPY15P-201ENST00000457163 923 ntBASIC19.37■□□□□ 0.69
FAM228BP0C875 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM228BP0C875 SEC1P-202ENST00000473944 940 ntBASIC19.37■□□□□ 0.69
FAM228BP0C875 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.37■□□□□ 0.69
FAM228BP0C875 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms