Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ATP5G1P1-201ENST00000448724 379 ntBASIC18.86■□□□□ 0.61
CD48P09326 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.86■□□□□ 0.61
CD48P09326 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.86■□□□□ 0.61
CD48P09326 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.86■□□□□ 0.61
CD48P09326 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.86■□□□□ 0.61
CD48P09326 AC005363.2-201ENST00000618631 242 ntBASIC18.86■□□□□ 0.61
CD48P09326 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.86■□□□□ 0.61
CD48P09326 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
CD48P09326 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.85■□□□□ 0.61
CD48P09326 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CD48P09326 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.85■□□□□ 0.61
CD48P09326 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CD48P09326 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.85■□□□□ 0.61
CD48P09326 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.85■□□□□ 0.61
CD48P09326 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CD48P09326 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 AL137013.1-201ENST00000432946 1228 ntBASIC18.85■□□□□ 0.61
CD48P09326 PVRIG2P-201ENST00000435460 978 ntBASIC18.85■□□□□ 0.61
CD48P09326 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.85■□□□□ 0.61
CD48P09326 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CD48P09326 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.85■□□□□ 0.61
CD48P09326 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 AC139887.4-201ENST00000607877 719 ntBASIC18.85■□□□□ 0.61
CD48P09326 AC011558.1-201ENST00000623459 338 ntBASIC18.85■□□□□ 0.61
CD48P09326 AC079602.3-201ENST00000623931 403 ntBASIC18.85■□□□□ 0.61
CD48P09326 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CD48P09326 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CD48P09326 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD48P09326 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.84■□□□□ 0.61
CD48P09326 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.84■□□□□ 0.61
CD48P09326 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CD48P09326 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 KRT18P57-201ENST00000443599 1254 ntBASIC18.84■□□□□ 0.61
CD48P09326 COX11P1-201ENST00000489116 835 ntBASIC18.84■□□□□ 0.61
CD48P09326 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.84■□□□□ 0.61
CD48P09326 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.84■□□□□ 0.61
CD48P09326 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.84■□□□□ 0.61
CD48P09326 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CD48P09326 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.84■□□□□ 0.61
CD48P09326 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CD48P09326 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.84■□□□□ 0.61
CD48P09326 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 AC012317.2-201ENST00000623305 2251 ntBASIC18.84■□□□□ 0.61
CD48P09326 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CD48P09326 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD48P09326 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.83■□□□□ 0.61
CD48P09326 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.83■□□□□ 0.61
CD48P09326 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD48P09326 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD48P09326 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.83■□□□□ 0.6
CD48P09326 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.83■□□□□ 0.6
CD48P09326 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CD48P09326 SPDYE15P-201ENST00000424157 909 ntBASIC18.83■□□□□ 0.6
CD48P09326 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.83■□□□□ 0.6
CD48P09326 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CD48P09326 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.83■□□□□ 0.6
CD48P09326 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.83■□□□□ 0.6
CD48P09326 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD48P09326 AC140113.3-201ENST00000605663 199 ntBASIC18.83■□□□□ 0.6
CD48P09326 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CD48P09326 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CD48P09326 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.83■□□□□ 0.6
CD48P09326 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD48P09326 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD48P09326 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms