Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL4A2P08572 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL4A2P08572 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A2P08572 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.23■□□□□ 0.51
COL4A2P08572 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 AC023274.1-201ENST00000418278 595 ntBASIC18.23■□□□□ 0.51
COL4A2P08572 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
COL4A2P08572 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.23■□□□□ 0.51
COL4A2P08572 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 AC093010.1-201ENST00000473625 1624 ntBASIC18.23■□□□□ 0.51
COL4A2P08572 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A2P08572 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL4A2P08572 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A2P08572 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.23■□□□□ 0.51
COL4A2P08572 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.23■□□□□ 0.51
COL4A2P08572 AC112482.1-201ENST00000492080 688 ntBASIC18.23■□□□□ 0.51
COL4A2P08572 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.23■□□□□ 0.51
COL4A2P08572 AC122714.2-201ENST00000502787 707 ntBASIC18.23■□□□□ 0.51
COL4A2P08572 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.23■□□□□ 0.51
COL4A2P08572 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A2P08572 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A2P08572 AC064836.3-201ENST00000607928 673 ntBASIC18.23■□□□□ 0.51
COL4A2P08572 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A2P08572 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL4A2P08572 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A2P08572 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
COL4A2P08572 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A2P08572 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL4A2P08572 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.22■□□□□ 0.51
COL4A2P08572 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A2P08572 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL4A2P08572 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL4A2P08572 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A2P08572 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.22■□□□□ 0.51
COL4A2P08572 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.22■□□□□ 0.51
COL4A2P08572 KLF4P1-201ENST00000412782 1185 ntBASIC18.22■□□□□ 0.51
COL4A2P08572 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.22■□□□□ 0.51
COL4A2P08572 RPS8P6-201ENST00000426177 609 ntBASIC18.22■□□□□ 0.51
COL4A2P08572 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.22■□□□□ 0.51
COL4A2P08572 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A2P08572 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.22■□□□□ 0.51
COL4A2P08572 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.22■□□□□ 0.51
COL4A2P08572 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.22■□□□□ 0.51
COL4A2P08572 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.22■□□□□ 0.51
COL4A2P08572 AC006557.2-201ENST00000592985 1240 ntBASIC18.22■□□□□ 0.51
COL4A2P08572 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.22■□□□□ 0.51
COL4A2P08572 MIR1199-201ENST00000621445 119 ntBASIC18.22■□□□□ 0.51
COL4A2P08572 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A2P08572 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL4A2P08572 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.22■□□□□ 0.51
COL4A2P08572 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.22■□□□□ 0.51
COL4A2P08572 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A2P08572 PCDHAC2-203ENST00000615316 3011 ntBASIC18.22■□□□□ 0.51
COL4A2P08572 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.21■□□□□ 0.51
COL4A2P08572 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.21■□□□□ 0.51
COL4A2P08572 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.21■□□□□ 0.51
COL4A2P08572 AC108073.2-201ENST00000464002 357 ntBASIC18.21■□□□□ 0.51
COL4A2P08572 AC136632.2-201ENST00000512891 861 ntBASIC18.21■□□□□ 0.51
COL4A2P08572 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.21■□□□□ 0.51
COL4A2P08572 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.21■□□□□ 0.51
COL4A2P08572 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.21■□□□□ 0.51
COL4A2P08572 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.21■□□□□ 0.51
COL4A2P08572 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL4A2P08572 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL4A2P08572 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COL4A2P08572 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms