Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP2P08253 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
MMP2P08253 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.3■□□□□ 0.52
MMP2P08253 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
MMP2P08253 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.3■□□□□ 0.52
MMP2P08253 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MMP2P08253 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP2P08253 FAM86EP-206ENST00000510506 987 ntBASIC18.3■□□□□ 0.52
MMP2P08253 DUTP2-201ENST00000519164 463 ntBASIC18.3■□□□□ 0.52
MMP2P08253 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP2P08253 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
MMP2P08253 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP2P08253 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP2P08253 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP2P08253 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP2P08253 AC005332.3-201ENST00000589904 676 ntBASIC18.3■□□□□ 0.52
MMP2P08253 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 AL390719.2-201ENST00000606993 987 ntBASIC18.3■□□□□ 0.52
MMP2P08253 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.3■□□□□ 0.52
MMP2P08253 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP2P08253 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP2P08253 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
MMP2P08253 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.29■□□□□ 0.52
MMP2P08253 AC008764.6-201ENST00000595909 2069 ntBASIC18.29■□□□□ 0.52
MMP2P08253 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.29■□□□□ 0.52
MMP2P08253 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
MMP2P08253 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.29■□□□□ 0.52
MMP2P08253 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.29■□□□□ 0.52
MMP2P08253 AL645929.1-201ENST00000420084 975 ntBASIC18.29■□□□□ 0.52
MMP2P08253 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.29■□□□□ 0.52
MMP2P08253 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.29■□□□□ 0.52
MMP2P08253 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.29■□□□□ 0.52
MMP2P08253 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.29■□□□□ 0.52
MMP2P08253 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.29■□□□□ 0.52
MMP2P08253 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.29■□□□□ 0.52
MMP2P08253 AL121956.5-201ENST00000625261 221 ntBASIC18.29■□□□□ 0.52
MMP2P08253 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MMP2P08253 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.29■□□□□ 0.52
MMP2P08253 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP2P08253 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.28■□□□□ 0.52
MMP2P08253 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.28■□□□□ 0.52
MMP2P08253 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.28■□□□□ 0.52
MMP2P08253 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.28■□□□□ 0.52
MMP2P08253 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 KRT18P35-201ENST00000510488 1269 ntBASIC18.28■□□□□ 0.52
MMP2P08253 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.28■□□□□ 0.52
MMP2P08253 GPR32P1-201ENST00000601788 811 ntBASIC18.28■□□□□ 0.52
MMP2P08253 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.28■□□□□ 0.52
MMP2P08253 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.28■□□□□ 0.52
MMP2P08253 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms