Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.32■□□□□ 0.52
SRPRAP08240 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SRPRAP08240 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.32■□□□□ 0.52
SRPRAP08240 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.32■□□□□ 0.52
SRPRAP08240 BNIP3P18-201ENST00000593976 575 ntBASIC18.32■□□□□ 0.52
SRPRAP08240 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.32■□□□□ 0.52
SRPRAP08240 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SRPRAP08240 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.32■□□□□ 0.52
SRPRAP08240 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SRPRAP08240 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.32■□□□□ 0.52
SRPRAP08240 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.31■□□□□ 0.52
SRPRAP08240 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.31■□□□□ 0.52
SRPRAP08240 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 NUS1P2-201ENST00000417358 873 ntBASIC18.31■□□□□ 0.52
SRPRAP08240 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.31■□□□□ 0.52
SRPRAP08240 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.31■□□□□ 0.52
SRPRAP08240 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.31■□□□□ 0.52
SRPRAP08240 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.31■□□□□ 0.52
SRPRAP08240 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.31■□□□□ 0.52
SRPRAP08240 AC005336.2-201ENST00000593183 939 ntBASIC18.31■□□□□ 0.52
SRPRAP08240 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SRPRAP08240 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SRPRAP08240 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.31■□□□□ 0.52
SRPRAP08240 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPRAP08240 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.3■□□□□ 0.52
SRPRAP08240 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SRPRAP08240 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SRPRAP08240 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SRPRAP08240 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SRPRAP08240 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.3■□□□□ 0.52
SRPRAP08240 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.3■□□□□ 0.52
SRPRAP08240 EMBP1-201ENST00000458200 901 ntBASIC18.3■□□□□ 0.52
SRPRAP08240 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.3■□□□□ 0.52
SRPRAP08240 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.3■□□□□ 0.52
SRPRAP08240 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.3■□□□□ 0.52
SRPRAP08240 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SRPRAP08240 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SRPRAP08240 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPRAP08240 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SRPRAP08240 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.29■□□□□ 0.52
SRPRAP08240 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SRPRAP08240 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SRPRAP08240 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.29■□□□□ 0.52
SRPRAP08240 AC112698.1-201ENST00000510299 916 ntBASIC18.29■□□□□ 0.52
SRPRAP08240 AC096582.2-201ENST00000510860 516 ntBASIC18.29■□□□□ 0.52
SRPRAP08240 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.29■□□□□ 0.52
SRPRAP08240 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
SRPRAP08240 AC009533.2-201ENST00000543664 586 ntBASIC18.29■□□□□ 0.52
SRPRAP08240 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SRPRAP08240 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.29■□□□□ 0.52
SRPRAP08240 AC114341.1-201ENST00000618070 349 ntBASIC18.29■□□□□ 0.52
SRPRAP08240 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.29■□□□□ 0.52
SRPRAP08240 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPRAP08240 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms