Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.83■■□□□ 1.09
CHGBP05060 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHGBP05060 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.83■■□□□ 1.09
CHGBP05060 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHGBP05060 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.83■■□□□ 1.09
CHGBP05060 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHGBP05060 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CHGBP05060 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CHGBP05060 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CHGBP05060 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.83■■□□□ 1.09
CHGBP05060 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.83■■□□□ 1.09
CHGBP05060 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHGBP05060 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.83■■□□□ 1.09
CHGBP05060 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.83■■□□□ 1.09
CHGBP05060 CHCHD2P8-201ENST00000429873 447 ntBASIC21.83■■□□□ 1.09
CHGBP05060 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.83■■□□□ 1.09
CHGBP05060 AL592071.1-201ENST00000611956 408 ntBASIC21.83■■□□□ 1.09
CHGBP05060 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
CHGBP05060 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHGBP05060 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHGBP05060 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHGBP05060 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.83■■□□□ 1.08
CHGBP05060 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.83■■□□□ 1.08
CHGBP05060 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.83■■□□□ 1.08
CHGBP05060 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.83■■□□□ 1.08
CHGBP05060 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHGBP05060 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.82■■□□□ 1.08
CHGBP05060 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 AC018470.1-201ENST00000624790 3129 ntBASIC21.82■■□□□ 1.08
CHGBP05060 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 AC100803.2-201ENST00000562459 1963 ntBASIC21.82■■□□□ 1.08
CHGBP05060 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.82■■□□□ 1.08
CHGBP05060 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 AC113404.2-201ENST00000507884 177 ntBASIC21.82■■□□□ 1.08
CHGBP05060 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
CHGBP05060 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.82■■□□□ 1.08
CHGBP05060 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CHGBP05060 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.82■■□□□ 1.08
CHGBP05060 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CHGBP05060 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHGBP05060 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.82■■□□□ 1.08
CHGBP05060 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CHGBP05060 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.81■■□□□ 1.08
CHGBP05060 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.81■■□□□ 1.08
CHGBP05060 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CHGBP05060 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.81■■□□□ 1.08
CHGBP05060 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.81■■□□□ 1.08
CHGBP05060 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.81■■□□□ 1.08
CHGBP05060 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.81■■□□□ 1.08
CHGBP05060 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.81■■□□□ 1.08
CHGBP05060 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CHGBP05060 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 AC124864.1-201ENST00000623408 392 ntBASIC21.81■■□□□ 1.08
CHGBP05060 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.81■■□□□ 1.08
CHGBP05060 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.81■■□□□ 1.08
CHGBP05060 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHGBP05060 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHGBP05060 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHGBP05060 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CHGBP05060 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms