Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN1O95832 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN1O95832 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN1O95832 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CLDN1O95832 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN1O95832 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN1O95832 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 AC005332.7-201ENST00000614046 2005 ntBASIC16.23■□□□□ 0.19
CLDN1O95832 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN1O95832 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CLDN1O95832 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN1O95832 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.23■□□□□ 0.19
CLDN1O95832 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 MED15P5-201ENST00000423150 992 ntBASIC16.23■□□□□ 0.19
CLDN1O95832 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 AC112482.1-201ENST00000492080 688 ntBASIC16.23■□□□□ 0.19
CLDN1O95832 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDN1O95832 AC145285.3-201ENST00000564603 959 ntBASIC16.23■□□□□ 0.19
CLDN1O95832 AC011840.4-201ENST00000578471 627 ntBASIC16.23■□□□□ 0.19
CLDN1O95832 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDN1O95832 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN1O95832 FAM197Y3-203ENST00000618346 717 ntBASIC16.23■□□□□ 0.19
CLDN1O95832 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN1O95832 AC093484.2-201ENST00000580996 2166 ntBASIC16.23■□□□□ 0.19
CLDN1O95832 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN1O95832 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLDN1O95832 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLDN1O95832 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN1O95832 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN1O95832 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN1O95832 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN1O95832 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 HTR7P1-202ENST00000624664 4411 ntBASIC16.22■□□□□ 0.19
CLDN1O95832 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CLDN1O95832 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN1O95832 AC004967.1-201ENST00000453589 447 ntBASIC16.22■□□□□ 0.19
CLDN1O95832 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN1O95832 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN1O95832 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 MIR3197-201ENST00000582241 73 ntBASIC16.22■□□□□ 0.19
CLDN1O95832 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN1O95832 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN1O95832 AL355877.3-201ENST00000622820 899 ntBASIC16.22■□□□□ 0.19
CLDN1O95832 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN1O95832 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLDN1O95832 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLDN1O95832 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN1O95832 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN1O95832 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN1O95832 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN1O95832 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN1O95832 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLDN1O95832 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLDN1O95832 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN1O95832 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CLDN1O95832 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN1O95832 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN1O95832 YBX2P1-201ENST00000394192 760 ntBASIC16.21■□□□□ 0.19
CLDN1O95832 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN1O95832 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN1O95832 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
CLDN1O95832 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms