Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ALX3O95076 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.12■□□□□ 0.17
ALX3O95076 AC026271.3-201ENST00000571884 352 ntBASIC16.12■□□□□ 0.17
ALX3O95076 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.12■□□□□ 0.17
ALX3O95076 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALX3O95076 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALX3O95076 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.12■□□□□ 0.17
ALX3O95076 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALX3O95076 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALX3O95076 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
ALX3O95076 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.12■□□□□ 0.17
ALX3O95076 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALX3O95076 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALX3O95076 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.12■□□□□ 0.17
ALX3O95076 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
ALX3O95076 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.11■□□□□ 0.17
ALX3O95076 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
ALX3O95076 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.11■□□□□ 0.17
ALX3O95076 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.11■□□□□ 0.17
ALX3O95076 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.11■□□□□ 0.17
ALX3O95076 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.11■□□□□ 0.17
ALX3O95076 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.11■□□□□ 0.17
ALX3O95076 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.11■□□□□ 0.17
ALX3O95076 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.11■□□□□ 0.17
ALX3O95076 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.11■□□□□ 0.17
ALX3O95076 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALX3O95076 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 AC004951.3-201ENST00000418645 1148 ntBASIC16.1■□□□□ 0.17
ALX3O95076 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.1■□□□□ 0.17
ALX3O95076 AC091390.4-202ENST00000476426 537 ntBASIC16.1■□□□□ 0.17
ALX3O95076 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ALX3O95076 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 KRT18P41-201ENST00000518924 1277 ntBASIC16.1■□□□□ 0.17
ALX3O95076 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.1■□□□□ 0.17
ALX3O95076 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.1■□□□□ 0.17
ALX3O95076 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.1■□□□□ 0.17
ALX3O95076 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 AC022211.2-201ENST00000585075 2527 ntBASIC16.1■□□□□ 0.17
ALX3O95076 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ALX3O95076 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 AC108860.2-201ENST00000562760 2183 ntBASIC16.1■□□□□ 0.17
ALX3O95076 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.1■□□□□ 0.17
ALX3O95076 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALX3O95076 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.1■□□□□ 0.17
ALX3O95076 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALX3O95076 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
ALX3O95076 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALX3O95076 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALX3O95076 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.09■□□□□ 0.17
ALX3O95076 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.09■□□□□ 0.17
ALX3O95076 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALX3O95076 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.09■□□□□ 0.17
ALX3O95076 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
ALX3O95076 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms