Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
TSPAN3O60637 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TSPAN3O60637 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.73■□□□□ 0.59
TSPAN3O60637 LINC00167-201ENST00000530583 1419 ntBASIC18.73■□□□□ 0.59
TSPAN3O60637 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TSPAN3O60637 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 GMCL1P1-201ENST00000463439 1581 ntBASIC18.72■□□□□ 0.59
TSPAN3O60637 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TSPAN3O60637 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TSPAN3O60637 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TSPAN3O60637 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN3O60637 AL020996.1-203ENST00000536896 2307 ntBASIC18.72■□□□□ 0.59
TSPAN3O60637 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TSPAN3O60637 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 RN7SL606P-201ENST00000472779 293 ntBASIC18.72■□□□□ 0.59
TSPAN3O60637 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN3O60637 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN3O60637 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.72■□□□□ 0.59
TSPAN3O60637 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN3O60637 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.72■□□□□ 0.59
TSPAN3O60637 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.72■□□□□ 0.59
TSPAN3O60637 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TSPAN3O60637 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TSPAN3O60637 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN3O60637 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN3O60637 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.71■□□□□ 0.59
TSPAN3O60637 ESPNP-201ENST00000270691 2015 ntBASIC18.71■□□□□ 0.59
TSPAN3O60637 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
TSPAN3O60637 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TSPAN3O60637 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.71■□□□□ 0.59
TSPAN3O60637 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TSPAN3O60637 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TSPAN3O60637 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
TSPAN3O60637 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.71■□□□□ 0.59
TSPAN3O60637 TSPY12P-201ENST00000421279 868 ntBASIC18.71■□□□□ 0.59
TSPAN3O60637 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.71■□□□□ 0.59
TSPAN3O60637 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TSPAN3O60637 AC008687.5-201ENST00000593746 558 ntBASIC18.71■□□□□ 0.59
TSPAN3O60637 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.71■□□□□ 0.59
TSPAN3O60637 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.71■□□□□ 0.59
TSPAN3O60637 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN3O60637 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
TSPAN3O60637 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.71■□□□□ 0.58
TSPAN3O60637 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TSPAN3O60637 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TSPAN3O60637 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TSPAN3O60637 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.7■□□□□ 0.58
TSPAN3O60637 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TSPAN3O60637 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.7■□□□□ 0.58
TSPAN3O60637 AC091607.1-201ENST00000490318 1060 ntBASIC18.7■□□□□ 0.58
TSPAN3O60637 AC113404.2-201ENST00000507884 177 ntBASIC18.7■□□□□ 0.58
TSPAN3O60637 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.7■□□□□ 0.58
TSPAN3O60637 AC074051.2-201ENST00000565115 352 ntBASIC18.7■□□□□ 0.58
TSPAN3O60637 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TSPAN3O60637 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms