Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 AC073508.3-201ENST00000619697 1419 ntBASIC17.16■□□□□ 0.34
PLOD3O60568 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 TERF1P1-201ENST00000311003 1181 ntBASIC17.16■□□□□ 0.34
PLOD3O60568 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.16■□□□□ 0.34
PLOD3O60568 AL137013.1-201ENST00000432946 1228 ntBASIC17.16■□□□□ 0.34
PLOD3O60568 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 ATP5G1P1-201ENST00000448724 379 ntBASIC17.16■□□□□ 0.34
PLOD3O60568 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.16■□□□□ 0.34
PLOD3O60568 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PLOD3O60568 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PLOD3O60568 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.16■□□□□ 0.34
PLOD3O60568 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.16■□□□□ 0.34
PLOD3O60568 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.16■□□□□ 0.34
PLOD3O60568 AL031432.5-201ENST00000641059 760 ntBASIC17.16■□□□□ 0.34
PLOD3O60568 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PLOD3O60568 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PLOD3O60568 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.16■□□□□ 0.34
PLOD3O60568 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.16■□□□□ 0.34
PLOD3O60568 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 GMCL1P1-201ENST00000463439 1581 ntBASIC17.15■□□□□ 0.34
PLOD3O60568 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.15■□□□□ 0.34
PLOD3O60568 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.15■□□□□ 0.34
PLOD3O60568 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PLOD3O60568 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
PLOD3O60568 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.15■□□□□ 0.34
PLOD3O60568 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.15■□□□□ 0.34
PLOD3O60568 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.15■□□□□ 0.34
PLOD3O60568 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.15■□□□□ 0.34
PLOD3O60568 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PLOD3O60568 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.15■□□□□ 0.34
PLOD3O60568 MIR3917-201ENST00000580971 93 ntBASIC17.15■□□□□ 0.34
PLOD3O60568 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PLOD3O60568 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 AL354751.1-201ENST00000412768 1863 ntBASIC17.15■□□□□ 0.34
PLOD3O60568 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.15■□□□□ 0.34
PLOD3O60568 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.15■□□□□ 0.34
PLOD3O60568 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PLOD3O60568 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PLOD3O60568 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.14■□□□□ 0.34
PLOD3O60568 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PLOD3O60568 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PLOD3O60568 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.14■□□□□ 0.33
PLOD3O60568 AL390961.4-201ENST00000623958 2535 ntBASIC17.14■□□□□ 0.33
PLOD3O60568 AC093677.2-201ENST00000600169 1863 ntBASIC17.14■□□□□ 0.33
PLOD3O60568 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PLOD3O60568 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 ABALON-201ENST00000629058 1903 ntBASIC17.14■□□□□ 0.33
PLOD3O60568 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.14■□□□□ 0.33
PLOD3O60568 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.14■□□□□ 0.33
PLOD3O60568 BX664615.1-201ENST00000443558 458 ntBASIC17.14■□□□□ 0.33
PLOD3O60568 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.14■□□□□ 0.33
PLOD3O60568 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PLOD3O60568 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PLOD3O60568 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms