Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXS1O43638 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXS1O43638 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXS1O43638 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 AP005901.3-202ENST00000581653 237 ntBASIC17.08■□□□□ 0.32
FOXS1O43638 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXS1O43638 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXS1O43638 CLEC4GP1-201ENST00000596555 870 ntBASIC17.08■□□□□ 0.32
FOXS1O43638 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.08■□□□□ 0.32
FOXS1O43638 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
FOXS1O43638 NEFHP1-201ENST00000412845 2629 ntBASIC17.08■□□□□ 0.32
FOXS1O43638 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
FOXS1O43638 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXS1O43638 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
FOXS1O43638 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
FOXS1O43638 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
FOXS1O43638 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXS1O43638 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
FOXS1O43638 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
FOXS1O43638 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
FOXS1O43638 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
FOXS1O43638 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXS1O43638 MTCL1P1-201ENST00000446207 792 ntBASIC17.07■□□□□ 0.32
FOXS1O43638 AP000867.3-201ENST00000524675 377 ntBASIC17.07■□□□□ 0.32
FOXS1O43638 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXS1O43638 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXS1O43638 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.07■□□□□ 0.32
FOXS1O43638 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXS1O43638 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXS1O43638 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXS1O43638 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXS1O43638 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXS1O43638 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXS1O43638 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXS1O43638 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.06■□□□□ 0.32
FOXS1O43638 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.06■□□□□ 0.32
FOXS1O43638 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 AC246785.2-201ENST00000432512 513 ntBASIC17.06■□□□□ 0.32
FOXS1O43638 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXS1O43638 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.06■□□□□ 0.32
FOXS1O43638 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXS1O43638 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXS1O43638 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXS1O43638 AC011840.4-201ENST00000578471 627 ntBASIC17.06■□□□□ 0.32
FOXS1O43638 MIR3652-201ENST00000579335 131 ntBASIC17.06■□□□□ 0.32
FOXS1O43638 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXS1O43638 AC012313.10-201ENST00000623509 926 ntBASIC17.06■□□□□ 0.32
FOXS1O43638 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
FOXS1O43638 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXS1O43638 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
FOXS1O43638 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXS1O43638 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
FOXS1O43638 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXS1O43638 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
FOXS1O43638 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
FOXS1O43638 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXS1O43638 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
FOXS1O43638 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXS1O43638 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms