Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PHGDHO43175 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 LINC01126-201ENST00000623515 1646 ntBASIC18.12■□□□□ 0.49
PHGDHO43175 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
PHGDHO43175 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PHGDHO43175 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PHGDHO43175 AC007663.1-201ENST00000438948 1240 ntBASIC18.12■□□□□ 0.49
PHGDHO43175 CCR12P-201ENST00000446203 998 ntBASIC18.12■□□□□ 0.49
PHGDHO43175 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.12■□□□□ 0.49
PHGDHO43175 SNORA78-201ENST00000459373 127 ntBASIC18.12■□□□□ 0.49
PHGDHO43175 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.12■□□□□ 0.49
PHGDHO43175 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.12■□□□□ 0.49
PHGDHO43175 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.12■□□□□ 0.49
PHGDHO43175 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PHGDHO43175 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 AC012317.2-201ENST00000623305 2251 ntBASIC18.12■□□□□ 0.49
PHGDHO43175 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.12■□□□□ 0.49
PHGDHO43175 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.12■□□□□ 0.49
PHGDHO43175 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHGDHO43175 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.11■□□□□ 0.49
PHGDHO43175 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.11■□□□□ 0.49
PHGDHO43175 BX088651.1-201ENST00000540551 451 ntBASIC18.11■□□□□ 0.49
PHGDHO43175 AL355075.4-201ENST00000554988 638 ntBASIC18.11■□□□□ 0.49
PHGDHO43175 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PHGDHO43175 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
PHGDHO43175 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHGDHO43175 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PHGDHO43175 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.11■□□□□ 0.49
PHGDHO43175 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PHGDHO43175 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.1■□□□□ 0.49
PHGDHO43175 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
PHGDHO43175 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.1■□□□□ 0.49
PHGDHO43175 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.1■□□□□ 0.49
PHGDHO43175 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.1■□□□□ 0.49
PHGDHO43175 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.1■□□□□ 0.49
PHGDHO43175 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.1■□□□□ 0.49
PHGDHO43175 KRT8P7-201ENST00000533003 1432 ntBASIC18.1■□□□□ 0.49
PHGDHO43175 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.1■□□□□ 0.49
PHGDHO43175 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.1■□□□□ 0.49
PHGDHO43175 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.1■□□□□ 0.49
PHGDHO43175 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.1■□□□□ 0.49
PHGDHO43175 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.1■□□□□ 0.49
PHGDHO43175 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.1■□□□□ 0.49
PHGDHO43175 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
PHGDHO43175 AC116562.4-202ENST00000641738 218 ntBASIC18.1■□□□□ 0.49
PHGDHO43175 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PHGDHO43175 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHGDHO43175 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PHGDHO43175 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PHGDHO43175 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.1■□□□□ 0.49
PHGDHO43175 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PHGDHO43175 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.09■□□□□ 0.49
PHGDHO43175 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.09■□□□□ 0.49
PHGDHO43175 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.09■□□□□ 0.49
PHGDHO43175 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms