Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.43■□□□□ 0.7
SPTLC1O15269 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.43■□□□□ 0.7
SPTLC1O15269 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.43■□□□□ 0.7
SPTLC1O15269 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.43■□□□□ 0.7
SPTLC1O15269 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.43■□□□□ 0.7
SPTLC1O15269 AC008687.5-201ENST00000593746 558 ntBASIC19.43■□□□□ 0.7
SPTLC1O15269 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.43■□□□□ 0.7
SPTLC1O15269 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.43■□□□□ 0.7
SPTLC1O15269 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.43■□□□□ 0.7
SPTLC1O15269 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
SPTLC1O15269 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTLC1O15269 KRT8P10-201ENST00000450021 1447 ntBASIC19.42■□□□□ 0.7
SPTLC1O15269 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTLC1O15269 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTLC1O15269 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC1O15269 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC1O15269 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC1O15269 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 AP000347.1-202ENST00000435868 847 ntBASIC19.42■□□□□ 0.7
SPTLC1O15269 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTLC1O15269 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTLC1O15269 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC1O15269 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC1O15269 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SPTLC1O15269 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.41■□□□□ 0.7
SPTLC1O15269 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 AC132938.6-201ENST00000623828 1655 ntBASIC19.41■□□□□ 0.7
SPTLC1O15269 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.41■□□□□ 0.7
SPTLC1O15269 TSPY12P-201ENST00000421279 868 ntBASIC19.41■□□□□ 0.7
SPTLC1O15269 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SPTLC1O15269 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.41■□□□□ 0.7
SPTLC1O15269 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.41■□□□□ 0.7
SPTLC1O15269 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.41■□□□□ 0.7
SPTLC1O15269 AL353801.3-201ENST00000609898 542 ntBASIC19.41■□□□□ 0.7
SPTLC1O15269 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SPTLC1O15269 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 PHGDH-209ENST00000641074 1780 ntBASIC19.41■□□□□ 0.7
SPTLC1O15269 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC1O15269 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.41■□□□□ 0.7
SPTLC1O15269 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC1O15269 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC1O15269 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC1O15269 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC1O15269 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
SPTLC1O15269 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 AC068472.1-201ENST00000474589 881 ntBASIC19.4■□□□□ 0.7
SPTLC1O15269 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.4■□□□□ 0.7
SPTLC1O15269 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.4■□□□□ 0.7
SPTLC1O15269 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC1O15269 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SPTLC1O15269 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.4■□□□□ 0.7
SPTLC1O15269 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.4■□□□□ 0.7
SPTLC1O15269 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC1O15269 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 AL020996.1-203ENST00000536896 2307 ntBASIC19.4■□□□□ 0.7
SPTLC1O15269 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC1O15269 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC1O15269 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SPTLC1O15269 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.39■□□□□ 0.7
SPTLC1O15269 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms