Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 CD177P1-201ENST00000606252 935 ntBASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 AC080080.1-201ENST00000625121 2420 ntBASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 KRT18P55-202ENST00000578578 1546 ntBASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 MIR4651-201ENST00000582622 73 ntBASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 DGCR10-201ENST00000609839 495 ntBASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 AC009053.2-201ENST00000563701 2365 ntBASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 AC106820.2-201ENST00000563775 3264 ntBASIC18.24■□□□□ 0.51
TRIM49D1C9J1S8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 AC141586.5-201ENST00000624546 2050 ntBASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM49D1C9J1S8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 PCDHA12-202ENST00000613593 2588 ntBASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms