Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL6A5A8TX70 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL6A5A8TX70 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL6A5A8TX70 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.02□□□□□ -0.17
COL6A5A8TX70 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.02□□□□□ -0.17
COL6A5A8TX70 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 AC025580.3-201ENST00000617932 1424 ntBASIC14.01□□□□□ -0.17
COL6A5A8TX70 Z82202.1-201ENST00000623446 1880 ntBASIC14.01□□□□□ -0.17
COL6A5A8TX70 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 MTCL1P1-201ENST00000446207 792 ntBASIC14.01□□□□□ -0.17
COL6A5A8TX70 GPR53P-205ENST00000457298 1084 ntBASIC14.01□□□□□ -0.17
COL6A5A8TX70 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A5A8TX70 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
COL6A5A8TX70 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
COL6A5A8TX70 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14□□□□□ -0.17
COL6A5A8TX70 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
COL6A5A8TX70 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14□□□□□ -0.17
COL6A5A8TX70 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14□□□□□ -0.17
COL6A5A8TX70 AC107890.1-201ENST00000422478 521 ntBASIC14□□□□□ -0.17
COL6A5A8TX70 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14□□□□□ -0.17
COL6A5A8TX70 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14□□□□□ -0.17
COL6A5A8TX70 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14□□□□□ -0.17
COL6A5A8TX70 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14□□□□□ -0.17
COL6A5A8TX70 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 AP001059.3-201ENST00000619053 235 ntBASIC14□□□□□ -0.17
COL6A5A8TX70 AC009093.7-201ENST00000623853 1223 ntBASIC14□□□□□ -0.17
COL6A5A8TX70 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 BCAR1-209ENST00000546196 1340 ntBASIC14□□□□□ -0.17
COL6A5A8TX70 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
COL6A5A8TX70 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14□□□□□ -0.17
COL6A5A8TX70 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14□□□□□ -0.17
COL6A5A8TX70 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14□□□□□ -0.17
COL6A5A8TX70 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14□□□□□ -0.17
COL6A5A8TX70 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14□□□□□ -0.17
COL6A5A8TX70 LINC01126-201ENST00000623515 1646 ntBASIC14□□□□□ -0.17
COL6A5A8TX70 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14□□□□□ -0.17
COL6A5A8TX70 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14□□□□□ -0.17
COL6A5A8TX70 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14□□□□□ -0.17
COL6A5A8TX70 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A5A8TX70 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14□□□□□ -0.17
COL6A5A8TX70 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A5A8TX70 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.99□□□□□ -0.17
COL6A5A8TX70 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A5A8TX70 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A5A8TX70 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A5A8TX70 PIN1P1-201ENST00000412108 996 ntBASIC13.99□□□□□ -0.17
COL6A5A8TX70 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.99□□□□□ -0.17
COL6A5A8TX70 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.99□□□□□ -0.17
COL6A5A8TX70 AC068137.2-201ENST00000605408 478 ntBASIC13.99□□□□□ -0.17
COL6A5A8TX70 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A5A8TX70 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A5A8TX70 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A5A8TX70 AC092667.1-201ENST00000434301 2586 ntBASIC13.99□□□□□ -0.17
COL6A5A8TX70 KRT8P47-201ENST00000604727 1398 ntBASIC13.99□□□□□ -0.17
COL6A5A8TX70 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms