Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
USP27XA6NNY8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.65■□□□□ 0.74
USP27XA6NNY8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP27XA6NNY8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP27XA6NNY8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
USP27XA6NNY8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP27XA6NNY8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP27XA6NNY8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP27XA6NNY8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP27XA6NNY8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.65■□□□□ 0.74
USP27XA6NNY8 AL138688.1-201ENST00000624851 1594 ntBASIC19.65■□□□□ 0.74
USP27XA6NNY8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP27XA6NNY8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.65■□□□□ 0.74
USP27XA6NNY8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.65■□□□□ 0.74
USP27XA6NNY8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP27XA6NNY8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
USP27XA6NNY8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
USP27XA6NNY8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
USP27XA6NNY8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP27XA6NNY8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.64■□□□□ 0.74
USP27XA6NNY8 AC011270.2-201ENST00000624293 2550 ntBASIC19.64■□□□□ 0.73
USP27XA6NNY8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP27XA6NNY8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.64■□□□□ 0.73
USP27XA6NNY8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP27XA6NNY8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP27XA6NNY8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
USP27XA6NNY8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP27XA6NNY8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP27XA6NNY8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 GUSBP6-202ENST00000438529 1198 ntBASIC19.63■□□□□ 0.73
USP27XA6NNY8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 AC083880.1-201ENST00000608266 535 ntBASIC19.63■□□□□ 0.73
USP27XA6NNY8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.63■□□□□ 0.73
USP27XA6NNY8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP27XA6NNY8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 AL162727.3-201ENST00000635661 2787 ntBASIC19.62■□□□□ 0.73
USP27XA6NNY8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.62■□□□□ 0.73
USP27XA6NNY8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP27XA6NNY8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.62■□□□□ 0.73
USP27XA6NNY8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.62■□□□□ 0.73
USP27XA6NNY8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.62■□□□□ 0.73
USP27XA6NNY8 AC083906.2-201ENST00000511578 360 ntBASIC19.62■□□□□ 0.73
USP27XA6NNY8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.62■□□□□ 0.73
USP27XA6NNY8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.62■□□□□ 0.73
USP27XA6NNY8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP27XA6NNY8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP27XA6NNY8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP27XA6NNY8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.61■□□□□ 0.73
USP27XA6NNY8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms