Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 KRT18P48-201ENST00000434763 852 ntBASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 VENTXP5-201ENST00000523979 775 ntBASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 ZNF444P1-201ENST00000559497 298 ntBASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC194A0A1B0GVG4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 KRT89P-201ENST00000620027 1478 ntBASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC194A0A1B0GVG4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 MIR662-201ENST00000384847 95 ntBASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 AC093010.1-201ENST00000473625 1624 ntBASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC194A0A1B0GVG4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms