Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 KRT18P55-202ENST00000578578 1546 ntBASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 AC009154.2-201ENST00000621177 724 ntBASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 AC008764.6-201ENST00000595909 2069 ntBASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 KRT18P35-201ENST00000510488 1269 ntBASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 AC010331.1-201ENST00000611423 582 ntBASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 AC116407.4-201ENST00000623319 1061 ntBASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-4A0A0C4DH59 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 AC087388.1-201ENST00000571370 1112 ntBASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 NOC2LP2-201ENST00000407594 1944 ntBASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-4A0A0C4DH59 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV5-4A0A0C4DH59 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV5-4A0A0C4DH59 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRBV5-4A0A0C4DH59 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms