Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 AP001094.4-201ENST00000579008 2176 ntBASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV6-7A0A0A0MS04 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC25A1P4-201ENST00000567977 778 ntBASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 PHGDH-209ENST00000641074 1780 ntBASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-7A0A0A0MS04 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 MIR3180-5-201ENST00000583743 153 ntBASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 AL023806.1-201ENST00000603994 1649 ntBASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-7A0A0A0MS04 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms