Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC187A0A096LP49 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 HLA-J-201ENST00000462773 1622 ntBASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 SART3-203ENST00000546611 1184 ntBASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 AC027601.4-201ENST00000611259 610 ntBASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 AL356309.3-201ENST00000624132 1934 ntBASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC187A0A096LP49 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 LINC00602-201ENST00000629776 2065 ntBASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 RPS2P1-201ENST00000434010 821 ntBASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 KRT18P65-201ENST00000439811 1286 ntBASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 AC092183.1-201ENST00000469884 875 ntBASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 IGHV3-22-201ENST00000520721 359 ntBASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 OR7E14P-202ENST00000530490 1290 ntBASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 AC104109.2-201ENST00000602919 1418 ntBASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC187A0A096LP49 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 FAM197Y3-203ENST00000618346 717 ntBASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 AL139288.1-201ENST00000623748 933 ntBASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC187A0A096LP49 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 AC093484.2-201ENST00000580996 2166 ntBASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms