Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 KRT8P17-201ENST00000453110 1448 ntBASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 AC128676.1-201ENST00000454392 318 ntBASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 AC006557.6-201ENST00000623071 864 ntBASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.58□□□□□ -0.23
TRAV9-2A0A087WT02 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
TRAV9-2A0A087WT02 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 FAM197Y4-202ENST00000622692 608 ntBASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV9-2A0A087WT02 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms