Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 FLJ13224-201ENST00000313737 1514 ntBASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 UNC93B2-201ENST00000285383 730 ntBASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 CCR12P-201ENST00000446203 998 ntBASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV30A0A087WSZ9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AC009102.3-201ENST00000623118 1491 ntBASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AC009053.2-201ENST00000563701 2365 ntBASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 MIR149-201ENST00000384879 89 ntBASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV30A0A087WSZ9 CROCCP1-201ENST00000426910 5675 ntBASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 AL163051.1-201ENST00000569214 1512 ntBASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 AL353719.1-201ENST00000566847 864 ntBASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms