Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 HCG4P8-203ENST00000443049 980 ntBASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 AP002414.4-201ENST00000589764 1148 ntBASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 IGHV3-41-201ENST00000613121 348 ntBASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 LINC00602-201ENST00000629776 2065 ntBASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX9Q9Y5X1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 AC090616.6-201ENST00000582640 721 ntBASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 KRT18P1-202ENST00000452408 1331 ntBASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 AC090164.3-201ENST00000610780 2143 ntBASIC19.45■□□□□ 0.7
SNX9Q9Y5X1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 AC009113.1-201ENST00000570267 2443 ntBASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 GUSBP12-201ENST00000513727 720 ntBASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 PHGDH-209ENST00000641074 1780 ntBASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX9Q9Y5X1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms