Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP3Q9Y446 FAM210CP-201ENST00000445714 574 ntBASIC18.31■□□□□ 0.52
PKP3Q9Y446 AL359075.1-203ENST00000462729 1002 ntBASIC18.31■□□□□ 0.52
PKP3Q9Y446 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.31■□□□□ 0.52
PKP3Q9Y446 DUX4L26-201ENST00000489078 1255 ntBASIC18.31■□□□□ 0.52
PKP3Q9Y446 AC008687.5-201ENST00000593746 558 ntBASIC18.31■□□□□ 0.52
PKP3Q9Y446 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.31■□□□□ 0.52
PKP3Q9Y446 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.31■□□□□ 0.52
PKP3Q9Y446 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP3Q9Y446 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PKP3Q9Y446 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PKP3Q9Y446 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP3Q9Y446 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PKP3Q9Y446 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 FAM8A6P-201ENST00000407496 1135 ntBASIC18.3■□□□□ 0.52
PKP3Q9Y446 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 AC063952.2-201ENST00000498792 1227 ntBASIC18.3■□□□□ 0.52
PKP3Q9Y446 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PKP3Q9Y446 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP3Q9Y446 AC026471.1-201ENST00000564629 3026 ntBASIC18.3■□□□□ 0.52
PKP3Q9Y446 BICD1-207ENST00000551848 1962 ntBASIC18.3■□□□□ 0.52
PKP3Q9Y446 PKD1P1-201ENST00000458669 6805 ntBASIC18.29■□□□□ 0.52
PKP3Q9Y446 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 AC135776.1-201ENST00000319817 2481 ntBASIC18.29■□□□□ 0.52
PKP3Q9Y446 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP3Q9Y446 SPDYE15P-201ENST00000424157 909 ntBASIC18.29■□□□□ 0.52
PKP3Q9Y446 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP3Q9Y446 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP3Q9Y446 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP3Q9Y446 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP3Q9Y446 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP3Q9Y446 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PKP3Q9Y446 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.29■□□□□ 0.52
PKP3Q9Y446 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PKP3Q9Y446 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 AC022616.7-201ENST00000525383 220 ntBASIC18.28■□□□□ 0.52
PKP3Q9Y446 AL136038.4-201ENST00000603606 1261 ntBASIC18.28■□□□□ 0.52
PKP3Q9Y446 AC135050.7-201ENST00000624508 2218 ntBASIC18.28■□□□□ 0.52
PKP3Q9Y446 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP3Q9Y446 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PKP3Q9Y446 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKP3Q9Y446 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PKP3Q9Y446 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP3Q9Y446 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP3Q9Y446 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP3Q9Y446 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.27■□□□□ 0.52
PKP3Q9Y446 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP3Q9Y446 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKP3Q9Y446 AC093677.2-201ENST00000600169 1863 ntBASIC18.27■□□□□ 0.52
PKP3Q9Y446 AL024508.2-201ENST00000607749 1894 ntBASIC18.27■□□□□ 0.52
PKP3Q9Y446 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PKP3Q9Y446 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP3Q9Y446 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms