Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 AL049812.1-201ENST00000432563 2267 ntBASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SORCS3Q9UPU3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 HOXB1-202ENST00000577092 1414 ntBASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 RN7SL606P-201ENST00000472779 293 ntBASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.18■□□□□ 0.66
SORCS3Q9UPU3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 IGHGP-201ENST00000390555 1178 ntBASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 MINOS1P3-201ENST00000457048 203 ntBASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SORCS3Q9UPU3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 POM121L3P-201ENST00000419331 1163 ntBASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SORCS3Q9UPU3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.15■□□□□ 0.66
SORCS3Q9UPU3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms