Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 CA15P1-201ENST00000481698 905 ntBASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 AC010331.1-201ENST00000611423 582 ntBASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL4Q9UJQ4 KRT18P55-202ENST00000578578 1546 ntBASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 HOXB1-202ENST00000577092 1414 ntBASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL4Q9UJQ4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 PRORSD1P-202ENST00000563365 2154 ntBASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 CRYGFP-201ENST00000418459 633 ntBASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 AL024508.2-201ENST00000607749 1894 ntBASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms