Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSFQ9UBX1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 AC074051.2-201ENST00000565115 352 ntBASIC17.11■□□□□ 0.33
CTSFQ9UBX1 AC012615.1-201ENST00000565797 1299 ntBASIC17.11■□□□□ 0.33
CTSFQ9UBX1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSFQ9UBX1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 AL845331.1-201ENST00000424978 1190 ntBASIC17.1■□□□□ 0.33
CTSFQ9UBX1 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 AC091607.1-201ENST00000490318 1060 ntBASIC17.1■□□□□ 0.33
CTSFQ9UBX1 AC104819.1-201ENST00000504587 486 ntBASIC17.1■□□□□ 0.33
CTSFQ9UBX1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 AP005901.3-202ENST00000581653 237 ntBASIC17.1■□□□□ 0.33
CTSFQ9UBX1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.1■□□□□ 0.33
CTSFQ9UBX1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSFQ9UBX1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 LINC00602-201ENST00000629776 2065 ntBASIC17.09■□□□□ 0.33
CTSFQ9UBX1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 NUS1P1-201ENST00000446295 882 ntBASIC17.09■□□□□ 0.33
CTSFQ9UBX1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 FOSL1P1-201ENST00000511041 816 ntBASIC17.09■□□□□ 0.33
CTSFQ9UBX1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 Z69720.1-201ENST00000601483 472 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms