Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PPARGC1AQ9UBK2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPARGC1AQ9UBK2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PPARGC1AQ9UBK2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 AC009102.3-201ENST00000623118 1491 ntBASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 PVRIG2P-201ENST00000435460 978 ntBASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 AL590326.2-201ENST00000625139 305 ntBASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPARGC1AQ9UBK2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 AL359075.1-203ENST00000462729 1002 ntBASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 AC126763.1-201ENST00000552015 2118 ntBASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPARGC1AQ9UBK2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 HYMAI.1-201ENST00000620949 238 ntBASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 SDHAP2-201ENST00000455183 2001 ntBASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PPARGC1AQ9UBK2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 AC112907.2-201ENST00000448639 330 ntBASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PPARGC1AQ9UBK2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms