Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 BCL2-203ENST00000589955 5011 ntBASIC16.7■□□□□ 0.26
LRFN1Q9P244 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 AC026396.1-201ENST00000419388 421 ntBASIC16.7■□□□□ 0.26
LRFN1Q9P244 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 KRT17P6-201ENST00000453795 1220 ntBASIC16.7■□□□□ 0.26
LRFN1Q9P244 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 AC091304.2-201ENST00000564639 760 ntBASIC16.7■□□□□ 0.26
LRFN1Q9P244 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 LINC01711-201ENST00000598340 967 ntBASIC16.7■□□□□ 0.26
LRFN1Q9P244 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.7■□□□□ 0.26
LRFN1Q9P244 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRFN1Q9P244 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 AC004870.1-201ENST00000315132 882 ntBASIC16.69■□□□□ 0.26
LRFN1Q9P244 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 TSPY19P-201ENST00000418461 509 ntBASIC16.69■□□□□ 0.26
LRFN1Q9P244 TSPY18P-201ENST00000441642 509 ntBASIC16.69■□□□□ 0.26
LRFN1Q9P244 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 AC099336.1-202ENST00000602961 463 ntBASIC16.69■□□□□ 0.26
LRFN1Q9P244 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 AL024508.2-201ENST00000607749 1894 ntBASIC16.69■□□□□ 0.26
LRFN1Q9P244 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.69■□□□□ 0.26
LRFN1Q9P244 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRFN1Q9P244 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRFN1Q9P244 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 AL845331.1-201ENST00000424978 1190 ntBASIC16.68■□□□□ 0.26
LRFN1Q9P244 AC246785.2-201ENST00000432512 513 ntBASIC16.68■□□□□ 0.26
LRFN1Q9P244 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.68■□□□□ 0.26
LRFN1Q9P244 AC138894.3-201ENST00000603787 634 ntBASIC16.68■□□□□ 0.26
LRFN1Q9P244 IFNL4P1-201ENST00000607083 540 ntBASIC16.68■□□□□ 0.26
LRFN1Q9P244 AL732292.2-201ENST00000609649 430 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms