Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 AC073621.1-201ENST00000392730 636 ntBASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 AC096633.1-201ENST00000422446 749 ntBASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 AC007967.2-201ENST00000432613 625 ntBASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 AD001527.2-201ENST00000622994 785 ntBASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 AC122714.2-201ENST00000502787 707 ntBASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 AC027796.2-201ENST00000575326 344 ntBASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 MTDHP5-201ENST00000598980 586 ntBASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 SIGLEC16-201ENST00000599858 1437 ntBASIC25.96■■□□□ 1.75
SLC52A1Q9NWF4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
SLC52A1Q9NWF4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SLC52A1Q9NWF4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC25.95■■□□□ 1.75
SLC52A1Q9NWF4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SLC52A1Q9NWF4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC25.95■■□□□ 1.75
SLC52A1Q9NWF4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
SLC52A1Q9NWF4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC25.95■■□□□ 1.75
SLC52A1Q9NWF4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.95■■□□□ 1.75
SLC52A1Q9NWF4 TBC1D3P5-201ENST00000579401 1545 ntBASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 BX005266.1-201ENST00000473402 457 ntBASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 AC006557.2-201ENST00000592985 1240 ntBASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
SLC52A1Q9NWF4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 CLDN5-201ENST00000403084 2357 ntBASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SLC52A1Q9NWF4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 RPS8P6-201ENST00000426177 609 ntBASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC25.93■■□□□ 1.74
SLC52A1Q9NWF4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms