Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 GPR32P1-201ENST00000601788 811 ntBASIC21.11■□□□□ 0.97
RBM28Q9NW13 AL445228.2-201ENST00000605589 952 ntBASIC21.11■□□□□ 0.97
RBM28Q9NW13 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.11■□□□□ 0.97
RBM28Q9NW13 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 NEFHP1-201ENST00000412845 2629 ntBASIC21.11■□□□□ 0.97
RBM28Q9NW13 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 LINC00167-201ENST00000530583 1419 ntBASIC21.11■□□□□ 0.97
RBM28Q9NW13 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.1■□□□□ 0.97
RBM28Q9NW13 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.1■□□□□ 0.97
RBM28Q9NW13 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RBM28Q9NW13 AC005332.3-201ENST00000589904 676 ntBASIC21.1■□□□□ 0.97
RBM28Q9NW13 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
RBM28Q9NW13 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
RBM28Q9NW13 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.1■□□□□ 0.97
RBM28Q9NW13 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM28Q9NW13 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 AC005332.1-201ENST00000577698 1310 ntBASIC21.09■□□□□ 0.97
RBM28Q9NW13 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBM28Q9NW13 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBM28Q9NW13 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBM28Q9NW13 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBM28Q9NW13 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 RNF126P1-202ENST00000569893 925 ntBASIC21.09■□□□□ 0.97
RBM28Q9NW13 REXO1L9P-201ENST00000604264 2108 ntBASIC21.09■□□□□ 0.97
RBM28Q9NW13 AL390719.2-201ENST00000606993 987 ntBASIC21.09■□□□□ 0.97
RBM28Q9NW13 AC004263.2-201ENST00000617183 678 ntBASIC21.09■□□□□ 0.97
RBM28Q9NW13 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBM28Q9NW13 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBM28Q9NW13 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.09■□□□□ 0.97
RBM28Q9NW13 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBM28Q9NW13 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBM28Q9NW13 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms