Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
FBXO28Q9NVF7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
FBXO28Q9NVF7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FBXO28Q9NVF7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FBXO28Q9NVF7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 KRT18P65-201ENST00000439811 1286 ntBASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 AP001269.4-201ENST00000609611 512 ntBASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 ESPNP-201ENST00000270691 2015 ntBASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 CROCCP3-202ENST00000420820 1947 ntBASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 INTS4P1-201ENST00000438455 1935 ntBASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.88■□□□□ 0.93
FBXO28Q9NVF7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 AC132938.6-201ENST00000623828 1655 ntBASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 AC120114.3-201ENST00000611923 658 ntBASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO28Q9NVF7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO28Q9NVF7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 GMCL1P1-201ENST00000463439 1581 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 AL590627.1-203ENST00000421194 1026 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 KRT18P67-201ENST00000432816 1264 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 FGFR3P6-201ENST00000457012 610 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 AC112698.1-201ENST00000510299 916 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 AC009533.2-201ENST00000543664 586 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 AP001005.1-201ENST00000571755 1248 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 AC011467.2-201ENST00000598425 242 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 AL773604.1-201ENST00000617417 272 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 AL355877.3-201ENST00000622820 899 ntBASIC20.85■□□□□ 0.93
FBXO28Q9NVF7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms