Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CISHQ9NSE2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CISHQ9NSE2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.42■□□□□ 0.7
CISHQ9NSE2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CISHQ9NSE2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CISHQ9NSE2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CISHQ9NSE2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CISHQ9NSE2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CISHQ9NSE2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CISHQ9NSE2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 AP003733.1-201ENST00000491725 852 ntBASIC19.41■□□□□ 0.7
CISHQ9NSE2 KRT18P35-201ENST00000510488 1269 ntBASIC19.41■□□□□ 0.7
CISHQ9NSE2 AC087388.1-201ENST00000571370 1112 ntBASIC19.41■□□□□ 0.7
CISHQ9NSE2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CISHQ9NSE2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CISHQ9NSE2 AC007613.1-201ENST00000572811 2597 ntBASIC19.4■□□□□ 0.7
CISHQ9NSE2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 AC132938.6-201ENST00000623828 1655 ntBASIC19.4■□□□□ 0.7
CISHQ9NSE2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 AL136038.3-201ENST00000561909 1096 ntBASIC19.4■□□□□ 0.7
CISHQ9NSE2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 AL445228.2-201ENST00000605589 952 ntBASIC19.4■□□□□ 0.7
CISHQ9NSE2 AL121956.5-201ENST00000625261 221 ntBASIC19.4■□□□□ 0.7
CISHQ9NSE2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CISHQ9NSE2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CISHQ9NSE2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CISHQ9NSE2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CISHQ9NSE2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 LINC00602-201ENST00000629776 2065 ntBASIC19.39■□□□□ 0.69
CISHQ9NSE2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 AL645929.1-201ENST00000420084 975 ntBASIC19.39■□□□□ 0.69
CISHQ9NSE2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 RNF126P1-202ENST00000569893 925 ntBASIC19.39■□□□□ 0.69
CISHQ9NSE2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 LINC00167-201ENST00000530583 1419 ntBASIC19.39■□□□□ 0.69
CISHQ9NSE2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms