Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 Z69720.1-201ENST00000601483 472 ntBASIC17.29■□□□□ 0.36
FAM60AQ9NP50 AC009154.2-201ENST00000621177 724 ntBASIC17.29■□□□□ 0.36
FAM60AQ9NP50 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.29■□□□□ 0.36
FAM60AQ9NP50 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM60AQ9NP50 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM60AQ9NP50 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 MTCL1P1-201ENST00000446207 792 ntBASIC17.27■□□□□ 0.36
FAM60AQ9NP50 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 FOSL1P1-201ENST00000511041 816 ntBASIC17.27■□□□□ 0.36
FAM60AQ9NP50 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 AL121894.2-201ENST00000602977 491 ntBASIC17.27■□□□□ 0.36
FAM60AQ9NP50 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.27■□□□□ 0.36
FAM60AQ9NP50 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FAM60AQ9NP50 AC135776.1-201ENST00000319817 2481 ntBASIC17.27■□□□□ 0.35
FAM60AQ9NP50 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FAM60AQ9NP50 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.27■□□□□ 0.35
FAM60AQ9NP50 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
FAM60AQ9NP50 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FAM60AQ9NP50 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FAM60AQ9NP50 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
FAM60AQ9NP50 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FAM60AQ9NP50 NSUN5P1-202ENST00000421140 1535 ntBASIC17.26■□□□□ 0.35
FAM60AQ9NP50 NSUN5P2-203ENST00000457352 1529 ntBASIC17.26■□□□□ 0.35
FAM60AQ9NP50 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 AC246785.2-201ENST00000432512 513 ntBASIC17.26■□□□□ 0.35
FAM60AQ9NP50 KRT18P65-201ENST00000439811 1286 ntBASIC17.26■□□□□ 0.35
FAM60AQ9NP50 UNC93B7-201ENST00000509439 705 ntBASIC17.26■□□□□ 0.35
FAM60AQ9NP50 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 AC099336.1-202ENST00000602961 463 ntBASIC17.26■□□□□ 0.35
FAM60AQ9NP50 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM60AQ9NP50 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms