Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.44■□□□□ 0.7
SYNCQ9H7C4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.43■□□□□ 0.7
SYNCQ9H7C4 AC005521.1-201ENST00000393351 872 ntBASIC19.43■□□□□ 0.7
SYNCQ9H7C4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 KRT18P57-201ENST00000443599 1254 ntBASIC19.43■□□□□ 0.7
SYNCQ9H7C4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 COX11P1-201ENST00000489116 835 ntBASIC19.43■□□□□ 0.7
SYNCQ9H7C4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 MIR3180-4-201ENST00000582223 153 ntBASIC19.43■□□□□ 0.7
SYNCQ9H7C4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 AL023973.1-201ENST00000624619 620 ntBASIC19.43■□□□□ 0.7
SYNCQ9H7C4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 GMCL1P1-201ENST00000463439 1581 ntBASIC19.43■□□□□ 0.7
SYNCQ9H7C4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNCQ9H7C4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 AL031432.5-201ENST00000641059 760 ntBASIC19.42■□□□□ 0.7
SYNCQ9H7C4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNCQ9H7C4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 AC135050.7-201ENST00000624508 2218 ntBASIC19.41■□□□□ 0.7
SYNCQ9H7C4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 BX664615.1-201ENST00000443558 458 ntBASIC19.41■□□□□ 0.7
SYNCQ9H7C4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 SDHAP2-201ENST00000455183 2001 ntBASIC19.41■□□□□ 0.7
SYNCQ9H7C4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNCQ9H7C4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms