Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.45■■□□□ 1.02
RNF41Q9H4P4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 TSPY12P-201ENST00000421279 868 ntBASIC21.44■■□□□ 1.02
RNF41Q9H4P4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 AC090616.6-201ENST00000582640 721 ntBASIC21.44■■□□□ 1.02
RNF41Q9H4P4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 BCL2-203ENST00000589955 5011 ntBASIC21.44■■□□□ 1.02
RNF41Q9H4P4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF41Q9H4P4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 AL096828.2-201ENST00000567259 1965 ntBASIC21.43■■□□□ 1.02
RNF41Q9H4P4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 UPK3BP1-201ENST00000428678 509 ntBASIC21.43■■□□□ 1.02
RNF41Q9H4P4 CHCHD2P8-201ENST00000429873 447 ntBASIC21.43■■□□□ 1.02
RNF41Q9H4P4 TSSC2-201ENST00000450217 709 ntBASIC21.43■■□□□ 1.02
RNF41Q9H4P4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 AC016734.2-201ENST00000624325 1377 ntBASIC21.43■■□□□ 1.02
RNF41Q9H4P4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF41Q9H4P4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 KRT18P65-201ENST00000439811 1286 ntBASIC21.42■■□□□ 1.02
RNF41Q9H4P4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.42■■□□□ 1.02
RNF41Q9H4P4 GUSBP12-201ENST00000513727 720 ntBASIC21.42■■□□□ 1.02
RNF41Q9H4P4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 AC009154.2-201ENST00000621177 724 ntBASIC21.42■■□□□ 1.02
RNF41Q9H4P4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF41Q9H4P4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms